BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027D12LP1|AL428727
(842 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1256 393 e-109
3x_Contig1183 104 3e-22
3x_Contig866 104 3e-22
>3x_Contig1256
Length = 6519
Score = 393 bits (189), Expect = e-109
Identities = 193/197 (97%)
Strand = Plus / Plus
Query: 646 actttttgwagagcttgaaattgcattaaaagacawatattgtaataccattgccatgaa 705
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4145 actttttgaagagcttgaaattgcattaaaagacaaatattgtaataccattgccatgaa 4204
Query: 706 accgataatagtggcagaatattggttttgccataccgtcgcwaaaggttggttatctag 765
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4205 accgataatagtggcagaatattggttttgccataccgtcgcaaaaggttggttatctag 4264
Query: 766 agtcgtctttatatcctggcaaacaagcaatagcwccagtgtgcagcctagaaagacaaa 825
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 4265 agtcgtctttatatcctggcaaacaagcaatagcaccagtgtgcagcctagaaagacaaa 4324
Query: 826 caacattgagtaattga 842
|||||||||||||||||
Sbjct: 4325 caacattgagtaattga 4341
>3x_Contig1183
Length = 3176
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct: 530 ttttttttttttttttttttttttttttttttttttttttttttttttttttttttttgt 471
Query: 624 tttttt 629
||||||
Sbjct: 470 tttttt 465
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| |||||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 598 tttttttttgtttttttttttttttttttttttttttttttttttttttttttttttttt 539
Query: 624 tttttt 629
||||||
Sbjct: 538 tttttt 533
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
||||||||| ||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 595 ttttttgttttttttttttttttttttttttttttttttttttttttttttttttttttt 536
Query: 624 tttttt 629
||||||
Sbjct: 535 tttttt 530
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct: 512 ttttttttttttttttttttttttttttttttttttttttgttttttttttttttttttt 453
Query: 624 tttttt 629
||||||
Sbjct: 452 tttttt 447
Score = 102 bits (49), Expect = 1e-21
Identities = 64/69 (92%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| |||||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 481 tttttttttgtttttttttttttttttttttttttttttt-ttttttttttttttttttt 423
Query: 624 ttttttatt 632
|||||||||
Sbjct: 422 ttttttatt 414
Score = 102 bits (49), Expect = 1e-21
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 182 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 123
Query: 624 ttttttatt 632
|||||||||
Sbjct: 122 ttttttatt 114
Score = 100 bits (48), Expect = 6e-21
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 544 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 485
Query: 624 ttttttattgttgttt 639
|||||| || ||||||
Sbjct: 484 ttttttttttttgttt 469
Score = 100 bits (48), Expect = 6e-21
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 554 ttttttgtccttttttgttgtttttttttttttttttttttttkttttttgttktttttt 613
|||||||| |||||| || ||||||||||||||||||||||| |||||| || ||||||
Sbjct: 254 ttttttgttttttttttttatttttttttttttttttttttttttttttttttttttttt 195
Query: 614 ttttttttgttttttt 629
|||||||| |||||||
Sbjct: 194 tttttttttttttttt 179
Score = 100 bits (48), Expect = 6e-21
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 554 ttttttgtccttttttgttgtttttttttttttttttttttttkttttttgttktttttt 613
|||||||| |||||| || ||||||||||||||||||||||| |||||| || ||||||
Sbjct: 595 ttttttgttttttttttttttttttttttttttttttttttttttttttttttttttttt 536
Query: 614 ttttttttgttttttt 629
|||||||| |||||||
Sbjct: 535 tttttttttttttttt 520
>3x_Contig866
Length = 4028
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct: 246 ttttttttttttttttttttttttttttttttttttttttgttttttttttttttttttt 187
Query: 624 tttttt 629
||||||
Sbjct: 186 tttttt 181
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||| |
Sbjct: 192 ttttttttttttttttttttttttttttttttttttttttgtttttttttttttttttat 133
Query: 624 tttttt 629
||||||
Sbjct: 132 tttttt 127
Score = 104 bits (50), Expect = 3e-22
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || ||||||||||||||||
Sbjct: 264 ttttttttttttttttttttttttttttttttttttttttttttttttttttttttttgt 205
Query: 624 tttttt 629
||||||
Sbjct: 204 tttttt 199
Score = 100 bits (48), Expect = 6e-21
Identities = 68/76 (89%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 278 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 219
Query: 624 ttttttattgttgttt 639
|||||| || ||||||
Sbjct: 218 ttttttttttttgttt 203
Score = 100 bits (48), Expect = 6e-21
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 574 tttttttttttttttttttttttkttttttgttkttttttttttttttgttttttt 629
||||||||||||||||||||||| |||||| || ||||||||||||||||||||||
Sbjct: 200 ttttttttttttttttttttttttttttttttttttttttttttttttgttttttt 145
Score = 100 bits (48), Expect = 6e-21
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 564 ttttttgttgtttttttttttttttttttttttkttttttgttkttttttttttttttgt 623
|||||| || ||||||||||||||||||||||| |||||| || |||||||||||||| |
Sbjct: 275 tttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt 216
Query: 624 ttttttattgtt 635
|||||| |||||
Sbjct: 215 tttttttttgtt 204
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.44 0.721 1.36
Gapped
Lambda K H
1.44 0.721 1.36
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 63,993
Number of Sequences: 1807
Number of extensions: 63993
Number of successful extensions: 20015
Number of sequences better than 1.0e-20: 3
length of query: 842
length of database: 10,358,551
effective HSP length: 16
effective length of query: 826
effective length of database: 10,329,639
effective search space: 8532281814
effective search space used: 8532281814
T: 0
A: 40
X1: 5 (10.4 bits)
X2: 14 (29.1 bits)
S1: 11 (23.3 bits)
S2: 48 (100.2 bits)